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Release v1.0: FastQ to BAM pipeline

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@Aerin13 Aerin13 released this 04 Aug 17:24
· 360 commits to master since this release
v1.0
e04be5a

The sequence_handling wiki is fully up to date with this release.

This release includes the following functional handlers:

  • Quality_Assessment
  • Adapter_Trimming
  • Quality_Trimming
  • Read_Mapping
  • SAM_Processing
  • Coverage_Mapping

This release also includes nonfunctional code for the following:

  • GBS_Demultiplexing
  • Coverage_Mapping plots with R
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