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Pangenome Quality Assessment

Agenda

Next steps

  • Setup a nextflow workflow that produces plots for quality assessment of pangenome graphs

Plots

  • VG:
    • SNARL statistics
  • Panacus:
    • Path lengths / Haplotype sizes
    • Similarity Plots
    • Coverage Line
    • Node-Length Distribution
    • Growth Plots
    • Coverage Histogram

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Pangenome Quality Assessment

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