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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

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  1. igv.js igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    JavaScript 702 243

  2. igv-webapp igv-webapp Public

    IGV Web App

    JavaScript 126 50

  3. igv igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 709 401

  4. igv-reports igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 395 59

  5. igv-notebook igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    JavaScript 80 11

Repositories

Showing 10 of 39 repositories
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    igvteam/igv’s past year of commit activity
    Java 709 MIT 401 187 0 Updated Dec 27, 2025
  • igv-webapp Public

    IGV Web App

    igvteam/igv-webapp’s past year of commit activity
    JavaScript 126 MIT 50 3 0 Updated Dec 18, 2025
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    igvteam/igv.js’s past year of commit activity
    JavaScript 702 MIT 243 85 0 Updated Dec 18, 2025
  • igvweb-mcp Public
    igvteam/igvweb-mcp’s past year of commit activity
    JavaScript 0 0 0 0 Updated Dec 17, 2025
  • igv-data Public

    IGV genome configuration files and associated metadata.

    igvteam/igv-data’s past year of commit activity
    JavaScript 1 MIT 1 0 0 Updated Dec 8, 2025
  • igv-docs Public

    Markdown-based documentation website - IGV desktop application

    igvteam/igv-docs’s past year of commit activity
    JavaScript 7 2 2 0 Updated Dec 7, 2025
  • igv-mcp Public

    An MCP (Model Context Protocol) server for controlling Integrative Genomics Viewer (IGV)

    igvteam/igv-mcp’s past year of commit activity
    JavaScript 0 0 0 0 Updated Dec 7, 2025
  • spacewalk Public

    Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    igvteam/spacewalk’s past year of commit activity
    JavaScript 11 MIT 1 1 0 Updated Nov 8, 2025
  • igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    igvteam/igv-reports’s past year of commit activity
    Python 395 MIT 59 1 0 Updated Nov 3, 2025
  • igv-widgets Public

    UI widgets for igvteam applications

    igvteam/igv-widgets’s past year of commit activity
    JavaScript 0 3 0 0 Updated Nov 3, 2025
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