new recipe: mongodb

recipes/mongodb/files/0001-fix-compilation-errors-with-v8-3.25.patch

@@ -0,0 +1,74 @@
+From be4275d5af4f59024ebcfeb677706687c670611a Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Wed, 22 Jul 2015 15:12:27 +0200
+Subject: [PATCH] fix compilation errors with v8-3.25
+
+---
+ src/mongo/scripting/engine_v8-3.25.cpp | 6 +++---
+ src/mongo/scripting/v8-3.25_db.cpp     | 5 +++--
+ 2 files changed, 6 insertions(+), 5 deletions(-)
+
+diff --git a/src/mongo/scripting/engine_v8-3.25.cpp b/src/mongo/scripting/engine_v8-3.25.cpp
+index 14b2a43..bfbb3ce 100644
+--- a/src/mongo/scripting/engine_v8-3.25.cpp
++++ b/src/mongo/scripting/engine_v8-3.25.cpp
+@@ -1501,7 +1501,7 @@ v8::Local<v8::Value> V8Scope::mongoToV8Element(const BSONElement& elem, bool rea
+         case mongo::Object:
+             return mongoToLZV8(elem.embeddedObject(), readOnly);
+         case mongo::Date:
+-            return v8::Date::New(_isolate, static_cast<double>(elem.date.toMillisSinceEpoch()));
++            return v8::Date::New(_isolate, static_cast<double>(elem.Date().toMillisSinceEpoch()));
+         case mongo::Bool:
+             return v8::Boolean::New(_isolate, elem.boolean());
+         case mongo::EOO:
+@@ -1536,7 +1536,7 @@ v8::Local<v8::Value> V8Scope::mongoToV8Element(const BSONElement& elem, bool rea
+         case mongo::bsonTimestamp: {
+             v8::TryCatch tryCatch;
+
+-            argv[0] = v8::Number::New(_isolate, elem.timestampTime() / 1000);
++            argv[0] = v8::Number::New(_isolate, elem.timestampTime().toMillisSinceEpoch() / 1000);
+             argv[1] = v8::Number::New(_isolate, elem.timestampInc());
+
+             v8::Local<v8::Value> ret = TimestampFT()->GetFunction()->NewInstance(2, argv);
+@@ -1721,7 +1721,7 @@ void V8Scope::v8ToMongoElement(BSONObjBuilder& b,
+     }
+     if (value->IsDate()) {
+         long long dateval = (long long)(v8::Date::Cast(*value)->NumberValue());
+-        b.appendDate(sname, Date_t((unsigned long long)dateval));
++        b.appendDate(sname, Date_t().fromMillisSinceEpoch((unsigned long long)dateval));
+         return;
+     }
+     if (value->IsExternal())
+diff --git a/src/mongo/scripting/v8-3.25_db.cpp b/src/mongo/scripting/v8-3.25_db.cpp
+index e4fd6d8..9e81974 100644
+--- a/src/mongo/scripting/v8-3.25_db.cpp
++++ b/src/mongo/scripting/v8-3.25_db.cpp
+@@ -42,6 +42,7 @@
+ #include "mongo/util/base64.h"
+ #include "mongo/util/hex.h"
+ #include "mongo/util/text.h"
++#include "mongo/bson/timestamp.h"
+
+ using namespace std;
+ using std::unique_ptr;
+@@ -135,7 +136,7 @@ v8::Local<v8::Value> mongoConsExternal(V8Scope* scope,
+     verify(scope->MongoFT()->HasInstance(args.This()));
+
+     auto statusWithHost = ConnectionString::parse(host);
+-    if (!status.isOK()) {
++    if (!statusWithHost.isOK()) {
+         return v8AssertionException(statusWithHost.getStatus().reason());
+     }
+
+@@ -774,7 +775,7 @@ v8::Local<v8::Value> dbTimestampInit(V8Scope* scope,
+             return v8AssertionException("Timestamp increment must be a number");
+         }
+         int64_t t = args[0]->IntegerValue();
+-        int64_t largestVal = int64_t(OpTime::max().getSecs());
++        int64_t largestVal = int64_t(Timestamp::max().getSecs());
+         if (t > largestVal)
+             return v8AssertionException(str::stream() << "The first argument must be in seconds; "
+                                                       << t << " is too large (max " << largestVal
+-- 
+2.4.6
+

recipes/mongodb/files/0001-fix-missing-boost-library-in-third-party-src.patch

@@ -0,0 +1,25 @@
+From 4bafababda82061329c705f80c58e555bb21d407 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Tue, 21 Jul 2015 08:18:17 +0200
+Subject: [PATCH] fix missing boost library in third party src
+
+---
+ SConstruct | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/SConstruct b/SConstruct
+index 5c8d414..aa22aed 100644
+--- a/SConstruct
++++ b/SConstruct
+@@ -729,7 +729,7 @@ def printLocalInfo():
+
+ printLocalInfo()
+
+-boostLibs = [ "thread" , "filesystem" , "program_options", "system" ]
++boostLibs = [ "thread" , "filesystem" , "program_options", "system", "chrono" ]
+
+ onlyServer = len( COMMAND_LINE_TARGETS ) == 0 or ( len( COMMAND_LINE_TARGETS ) == 1 and str( COMMAND_LINE_TARGETS[0] ) in [ "mongod" , "mongos" , "test" ] )
+
+-- 
+2.4.6
+

recipes/mongodb/files/0001-fix-missing-search-for-system-asio-libs.patch

@@ -0,0 +1,51 @@
+From e79f7c8ae7b0ff2459a8136106a0692594ba0202 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Tue, 21 Jul 2015 11:17:19 +0200
+Subject: [PATCH] fix missing search for system asio libs
+
+---
+ SConstruct                 | 3 +++
+ src/third_party/SConscript | 6 ++----
+ 2 files changed, 5 insertions(+), 4 deletions(-)
+
+diff --git a/SConstruct b/SConstruct
+index 1f38ab7..ba91d2a 100644
+--- a/SConstruct
++++ b/SConstruct
+@@ -2203,6 +2203,9 @@ def doConfigure(myenv):
+             """):
+             conf.env.SetConfigHeaderDefine('MONGO_CONFIG_HAVE_FIPS_MODE_SET')
+
++    if use_system_version_of_library("asio"):
++        conf.CheckCXXHeader("boost/asio.hpp")
++
+     return conf.Finish()
+
+ env = doConfigure( env )
+diff --git a/src/third_party/SConscript b/src/third_party/SConscript
+index 594ea27..e1b4b88 100644
+--- a/src/third_party/SConscript
++++ b/src/third_party/SConscript
+@@ -162,6 +162,7 @@ if use_system_version_of_library("zlib"):
+         SYSLIBDEPS=[
+             env['LIBDEPS_ZLIB_SYSLIBDEP'],
+         ])
++    print("syslibdep: {}".format(env['LIBDEPS_ZLIB_SYSLIBDEP']))
+ else:
+     zlibEnv = env.Clone()
+     zlibEnv.InjectThirdPartyIncludePaths(libraries=['zlib'])
+@@ -304,10 +305,7 @@ if wiredtiger:
+         ])
+
+ if use_system_version_of_library("asio"):
+-    asioEnv = env.Clone(
+-        SYSLIBDEPS=[
+-            env['LIBDEPS_ASIO_SYSLIBDEP'],
+-        ])
++    asioEnv = env.Clone([])
+ else:
+     asioEnv = env.Clone()
+     asioEnv.InjectThirdPartyIncludePaths(libraries=['asio'])
+-- 
+2.4.6
+

recipes/mongodb/files/0001-include-operation-context-to-allow-dereferencing.patch

@@ -0,0 +1,24 @@
+From 53f27a872a3ec7591a437a35c577509033a35d19 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Thu, 23 Jul 2015 10:35:34 +0200
+Subject: [PATCH] include operation context to allow dereferencing
+
+---
+ src/mongo/scripting/v8-3.25_db.cpp | 1 +
+ 1 file changed, 1 insertion(+)
+
+diff --git a/src/mongo/scripting/v8-3.25_db.cpp b/src/mongo/scripting/v8-3.25_db.cpp
+index e4fd6d8..bef068c 100644
+--- a/src/mongo/scripting/v8-3.25_db.cpp
++++ b/src/mongo/scripting/v8-3.25_db.cpp
+@@ -35,6 +35,7 @@
+ #include "mongo/base/init.h"
+ #include "mongo/client/sasl_client_authenticate.h"
+ #include "mongo/db/namespace_string.h"
++#include "mongo/db/operation_context.h"
+ #include "mongo/s/d_state.h"
+ #include "mongo/scripting/engine_v8-3.25.h"
+ #include "mongo/scripting/v8-3.25_utils.h"
+-- 
+2.4.6
+

recipes/mongodb/files/0001-propagate-execution-environment-into-SCons.patch

@@ -0,0 +1,25 @@
+From 271460f8cad7d6c114e62b4d91859b1864c07716 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Tue, 21 Jul 2015 07:25:27 +0200
+Subject: [PATCH] propagate execution environment into SCons
+
+---
+ SConstruct | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/SConstruct b/SConstruct
+index 2a7ee46..0f05ee9 100644
+--- a/SConstruct
++++ b/SConstruct
+@@ -791,7 +791,7 @@ envDict = dict(BUILD_ROOT=buildDir,
+                CONFIG_HEADER_DEFINES={},
+                )
+
+-env = Environment(variables=env_vars, **envDict)
++env = Environment(variables=env_vars, ENV=os.environ, **envDict)
+ del envDict
+
+ env.AddMethod(env_os_is_wrapper, 'TargetOSIs')
+-- 
+2.4.6
+

recipes/mongodb/files/0001-remove-char-arguments-to-boost-mutex-constructors.patch

@@ -0,0 +1,34 @@
+From 26c0780746aecedf9d6fb73f0171620790638000 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Wed, 22 Jul 2015 14:26:03 +0200
+Subject: [PATCH] remove char arguments to boost::mutex constructors
+
+---
+ src/mongo/scripting/engine_v8-3.25.cpp | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/src/mongo/scripting/engine_v8-3.25.cpp b/src/mongo/scripting/engine_v8-3.25.cpp
+index b7f241c..14b2a43 100644
+--- a/src/mongo/scripting/engine_v8-3.25.cpp
++++ b/src/mongo/scripting/engine_v8-3.25.cpp
+@@ -382,7 +382,7 @@ void gcCallback(v8::GCType type, v8::GCCallbackFlags flags) {
+ }
+
+ V8ScriptEngine::V8ScriptEngine()
+-    : _globalInterruptLock("GlobalV8InterruptLock"), _opToScopeMap(), _deadlineMonitor() {}
++    : _globalInterruptLock(), _opToScopeMap(), _deadlineMonitor() {}
+
+ V8ScriptEngine::~V8ScriptEngine() {}
+
+@@ -525,7 +525,7 @@ V8Scope::V8Scope(V8ScriptEngine* engine)
+     : _engine(engine),
+       _connectState(NOT),
+       _cpuProfiler(),
+-      _interruptLock("ScopeInterruptLock"),
++      _interruptLock(),
+       _inNativeExecution(true),
+       _pendingKill(false),
+       _opId(0),
+-- 
+2.4.6
+

recipes/mongodb/files/0001-remove-debug-flag-from-build.patch

@@ -0,0 +1,24 @@
+From fa0455b9e9cb61afd90e07c5fdf9fb3517bd06c4 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Thu, 23 Jul 2015 11:57:23 +0200
+Subject: [PATCH] remove debug flag from build
+
+---
+ SConstruct | 1 -
+ 1 file changed, 1 deletion(-)
+
+diff --git a/SConstruct b/SConstruct
+index 0a3273a..908d726 100644
+--- a/SConstruct
++++ b/SConstruct
+@@ -1216,7 +1216,6 @@ if env.TargetOSIs('posix'):
+     env.Append( CCFLAGS=["-fno-omit-frame-pointer",
+                          "-fPIC",
+                          "-fno-strict-aliasing",
+-                         "-ggdb",
+                          "-pthread",
+                          "-Wall",
+                          "-Wsign-compare",
+-- 
+2.4.6
+

recipes/mongodb/files/0001-skip-logging-to-startup_log-at-startup.patch

@@ -0,0 +1,88 @@
+From 03ebd530208718687f81f3fc8c943d25ba8c5ee2 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Martin=20Hundeb=C3=B8ll?= <mnhu@prevas.dk>
+Date: Thu, 3 Dec 2015 08:56:24 +0100
+Subject: [PATCH] skip logging to startup_log at startup
+
+When running from embedded devices without RTC, the startup logging
+sometimes fails due to a time collision in startup_log. This is caused
+by creating the index key from the system hostname appended with the
+milliseconds since epoch, which in the embedded case is always approx.
+the same.
+
+Fix this by removing the logging at startup log.
+
+startup_log:
+https://docs.mongodb.org/manual/reference/local-database/#local.startup_log
+
+upstream bug report:
+https://jira.mongodb.org/browse/SERVER-21751
+---
+ src/mongo/db/db.cpp | 45 ---------------------------------------------
+ 1 file changed, 45 deletions(-)
+
+diff --git a/src/mongo/db/db.cpp b/src/mongo/db/db.cpp
+index 2b4ab0e..03735c1 100644
+--- a/src/mongo/db/db.cpp
++++ b/src/mongo/db/db.cpp
+@@ -198,49 +198,6 @@ public:
+     }
+ };
+
+-static void logStartup() {
+-    BSONObjBuilder toLog;
+-    stringstream id;
+-    id << getHostNameCached() << "-" << jsTime().asInt64();
+-    toLog.append("_id", id.str());
+-    toLog.append("hostname", getHostNameCached());
+-
+-    toLog.appendTimeT("startTime", time(0));
+-    toLog.append("startTimeLocal", dateToCtimeString(Date_t::now()));
+-
+-    toLog.append("cmdLine", serverGlobalParams.parsedOpts);
+-    toLog.append("pid", ProcessId::getCurrent().asLongLong());
+-
+-
+-    BSONObjBuilder buildinfo(toLog.subobjStart("buildinfo"));
+-    appendBuildInfo(buildinfo);
+-    appendStorageEngineList(&buildinfo);
+-    buildinfo.doneFast();
+-
+-    BSONObj o = toLog.obj();
+-
+-    OperationContextImpl txn;
+-
+-    ScopedTransaction transaction(&txn, MODE_X);
+-    Lock::GlobalWrite lk(txn.lockState());
+-    AutoGetOrCreateDb autoDb(&txn, "local", mongo::MODE_X);
+-    Database* db = autoDb.getDb();
+-    const std::string ns = "local.startup_log";
+-    Collection* collection = db->getCollection(ns);
+-    WriteUnitOfWork wunit(&txn);
+-    if (!collection) {
+-        BSONObj options = BSON("capped" << true << "size" << 10 * 1024 * 1024);
+-        bool shouldReplicateWrites = txn.writesAreReplicated();
+-        txn.setReplicatedWrites(false);
+-        ON_BLOCK_EXIT(&OperationContext::setReplicatedWrites, &txn, shouldReplicateWrites);
+-        uassertStatusOK(userCreateNS(&txn, db, ns, options));
+-        collection = db->getCollection(ns);
+-    }
+-    invariant(collection);
+-    uassertStatusOK(collection->insertDocument(&txn, o, false).getStatus());
+-    wunit.commit();
+-}
+-
+ static void checkForIdIndexes(OperationContext* txn, Database* db) {
+     if (db->name() == "local") {
+         // we do not need an _id index on anything in the local database
+@@ -581,8 +538,6 @@ static void _initAndListen(int listenPort) {
+
+     PeriodicTask::startRunningPeriodicTasks();
+
+-    logStartup();
+-
+     // MessageServer::run will return when exit code closes its socket
+     server->run();
+ }
+-- 
+2.6.2
+