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halophiles

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HaloArchaea-Metagenomics

axp-knickei / HaloArchaea-Metagenomics

A specialized, high-throughput Snakemake workflow designed for the metagenomic analysis of Haloarchaea in hypersaline ecosystems.

bioinformatics snakemake reproducible-research slurm metagenomics dram archaea metaspades apptainer checkm2 gtdb-tk haloarchaea halophiles hypersaline semibin2

Updated Dec 9, 2025
Python

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